Data and Text Processing for Health and Life Sciences

Dublin Core

Title

Data and Text Processing for Health and Life Sciences

Subject

Computer Science

Description

This open access book is a step-by-step introduction on how shell scripting can help solve many of the data processing tasks that Health and Life specialists face everyday with minimal software dependencies. The examples presented in the book show how simple command line tools can be used and combined to retrieve data and text from web resources, to filter and mine literature, and to explore the semantics encoded in biomedical ontologies. To store data this book relies on open standard text file formats, such as TSV, CSV, XML, and OWL, that can be open by any text editor or spreadsheet application. The first two chapters, Introduction and Resources, provide a brief introduction to the shell scripting and describe popular data resources in Health and Life Sciences.

Creator

Couto, Francisco M.

Source

https://library.oapen.org/bitstream/id/e8a688e5-0c31-44a7-8dc8-f5bfde0ee308/1007337.pdf

Publisher

Springer Nature

Date

2020

Contributor

Baihaqi

Rights

Creative Commons

Format

PDF

Language

English

Type

Textbooks

Files

1007337.pdf.jpg

Citation

Couto, Francisco M., “Data and Text Processing for Health and Life Sciences,” Open Educational Resource (OER) - Unsyiah Library, accessed September 28, 2022, http://uilis.unsyiah.ac.id/oer/items/show/5308.

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